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Intron Name: Anas_platyrhynchos_platyrhynchos_6_440566_441470_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

440566 - 441470

Intron Length:

905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACATCT

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

GAGCTGGTGACA

Flanking Amino Acid:

DMLPSIEITKLDLQWVQVLS

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

75.1

35.8

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

86.2

0.81

0.8

80.6

Minor 5ss

46.1

-0.4

2.9

66.5

44.4

Minor BPS

37.7

-0.9

2.4

44.47

Associated Gene:

Gene:

PAPSS2

Ensembl Gene ID:

ENSAPLG00000002394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002420

432625 - 459000

26376

ENSAPLT00000002419

432625 - 459000

26376

ENSAPLT00000021910

430941 - 460321

29381