Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_447561_458034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

447561 - 458034

Intron Length:

10474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATGAA

U12 Branch Point Sequence:

TCTGTTTCCATT

Flanking Amino Acid:

MDPGENCLPRGSTNVVYQAH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

60.3

0.26

1.2

51.7

43.9

Major PPT

71.3

0.48

0.9

71.4

34.4

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

44.5

-0.3

1.9

62.38

43.1

Associated Gene:

Gene:

PAPSS2

Ensembl Gene ID:

ENSAPLG00000002394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002420

432625 - 459000

26376

ENSAPLT00000002419

432625 - 459000

26376