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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4574599_4574732_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4574599 - 4574732

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATTT

Flanking Amino Acid:

MVLQYAEDVLSGKVAADNTV

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

40.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

90.7

0.92

0.7

89.4

25.6

Minor 5ss

31.2

-2.2

3.2

36.8

41.4

Minor BPS

75.8

0.89

1.5

91.23

32.5

Associated Gene:

Gene:

EIF3F

Ensembl Gene ID:

ENSAPLG00000004385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028489

4570991 - 4574990

4000

ENSAPLT00000004531

4570991 - 4575688

4698