About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_4595124_4595228_F

Intron Information:

Intron Rank:
9
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
4595124 - 4595228
Intron Length:
105

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGG|GTAGGAGTT
5'SS Class:
major
3'SS Sequence:
AATTTATTTGTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATCTAAT
U12 Branch Point Sequence:
GTTAATCTAATT
Flanking Amino Acid:
LKATVEAYSRIANRDLLSSI
Intron Amino Acid Position:
275

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
73.9
0.56
1.1
69.9
41.1
Major BPS
85.7
0.89
0.8
84
22.2
Major PPT
76.8
0.6
0.9
71.2
38.9
Minor 5ss
34.5
-1.8
3.8
47
48.4
Minor BPS
49.4
0.03
1.8
71.39
39.4

Associated Gene:

Gene:
ANXA7
Ensembl Gene ID:
ENSAPLG00000004494
Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000004653
4587104 - 4597442
10339