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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4610291_4611214_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4610291 - 4611214

Intron Length:
924

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTTGGG

5'SS Class:
major

3'SS Sequence:
TTTCTTACACCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAC

U12 Branch Point Sequence:
TTTTTCTTACAC

Flanking Amino Acid:
GKMARVFSVLREESESVLTL

Intron Amino Acid Position:
419

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.3
0.55
1.1
60.1
44.8

Major BPS
81.5
0.78
0.9
71.6
36.1

Major PPT
77.8
0.63
0.9
71.8
38

Minor 5ss
31.1
-2.2
3.3
41.2
45.1

Minor BPS
66.9
0.51
1.7
79.08
36.2

Associated Gene:

Gene:
PPP3CB

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4602813 - 4645632
42820