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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4675961_4676000_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4675961 - 4676000

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCAGACCGC

5'SS Class:

major

3'SS Sequence:

TCTCGGCGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCAAAA

U12 Branch Point Sequence:

CAGACCGCAAAA

Flanking Amino Acid:

QRHISKKGSLEMRLSHQDTT

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.2

0.27

1.2

51.2

41.9

Major BPS

46.3

-0.2

1.1

48.6

33.2

Major PPT

49.3

-0

1.2

48.5

38.5

Minor 5ss

-2.8

4.2

38.2

42.2

Minor BPS

40.5

-0.7

2.2

46.88

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032380

4675883 - 4689420

13538