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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4676057_4680144_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4676057 - 4680144

Intron Length:

4088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCAGAT

5'SS Class:

major

3'SS Sequence:

TCTGTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

CTCTTGTCATCT

Flanking Amino Acid:

DAASQSSRDTGHLTDSECNQ

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.2

40.1

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

86.9

0.83

0.7

84.6

30.3

Minor 5ss

36.2

-1.6

3.7

55.2

Minor BPS

43.1

-0.4

2.4

62.9

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032380

4675883 - 4689420

13538