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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4680316_4683254_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4680316 - 4683254

Intron Length:

2939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TGTTCTGTAATT

Flanking Amino Acid:

FRTCYDSEDSGREPSISSDT

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

0.65

0.8

74.2

35.2

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

64.9

0.55

84.22

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032380

4675883 - 4689420

13538