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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4784703_4784765_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4784703 - 4784765

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAGCCCCG

5'SS Class:

major

3'SS Sequence:

GAAAACAGCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGAAAAC

U12 Branch Point Sequence:

TTCCCCGCAGCC

Flanking Amino Acid:

SPSTQEPPAQAQEIRRFSTP

Intron Amino Acid Position:

845

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.2

54.1

44.5

Major BPS

48.2

-0.1

1.2

53.4

38.7

Major PPT

43.5

-0.3

1.1

27.5

35.6

Minor 5ss

-2.1

4.2

47.9

47.8

Minor BPS

43.8

-0.4

2.3

60.11

44.8

Associated Gene:

Gene:

SYNPO2L

Ensembl Gene ID:

ENSAPLG00000006548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006793

4784364 - 4815977

31614