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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4785566_4785670_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4785566 - 4785670

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCCAGGAGG

5'SS Class:

major

3'SS Sequence:

ACGTGGTGAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TGTATATCAGCC

Flanking Amino Acid:

TASIFLSTPSNSPLPAQPSP

Intron Amino Acid Position:

599

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.2

40.4

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

53.2

0.07

1.1

47.1

44.3

Minor 5ss

18.5

-3.6

3.5

22.8

29.6

Minor BPS

44.1

-0.4

1.9

57.56

40.5

Associated Gene:

Gene:

SYNPO2L

Ensembl Gene ID:

ENSAPLG00000006548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006793

4784364 - 4815977

31614