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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4785596_4785949_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4785596 - 4785949

Intron Length:

354

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCCATCTGC

5'SS Class:

major

3'SS Sequence:

CTTTGTATATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

CTTTGTATATCA

Flanking Amino Acid:

QRPATSSVIFSPAPPQHVVS

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.2

56.3

45.1

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

76.1

0.59

74.9

38.6

Minor 5ss

29.4

-2.4

3.9

42.6

44.3

Minor BPS

45.9

-0.3

2.2

63.52

43.3

Associated Gene:

Gene:

SYNPO2L

Ensembl Gene ID:

ENSAPLG00000006548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033134

4784364 - 4815977

31614