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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4799625_4799669_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4799625 - 4799669

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCCTACTAC

5'SS Class:

major

3'SS Sequence:

CAATGTGGCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

TACGGCGAGACT

Flanking Amino Acid:

GQPHLPARQRGEAPPGPQEE

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.28

1.2

47.2

45.5

Major BPS

55.9

0.15

1.2

Major PPT

55.5

0.12

1.1

45.9

45.3

Minor 5ss

34.7

-1.7

49.7

46.9

Minor BPS

37.4

-0.9

2.5

54.98

47.3

Associated Gene:

Gene:

SYNPO2L

Ensembl Gene ID:

ENSAPLG00000006548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033134

4784364 - 4815977

31614