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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4799753_4801528_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4799753 - 4801528

Intron Length:

1776

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCAAATTCC

5'SS Class:

major

3'SS Sequence:

TCCGGGCCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

AGCTGCTGAGCT

Flanking Amino Acid:

LEPICSHRCPGAPATTQPPQ

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

68.4

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

56.4

0.14

1.1

49.9

39.4

Minor 5ss

-2.2

3.9

45.2

42.9

Minor BPS

46.3

-0.2

2.1

64.16

45.7

Associated Gene:

Gene:

SYNPO2L

Ensembl Gene ID:

ENSAPLG00000006548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006793

4784364 - 4815977

31614