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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4828846_4829543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4828846 - 4829543

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCACA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATAAT

U12 Branch Point Sequence:

ACCCAGTGAAGA

Flanking Amino Acid:

GIPASTAPMQRPPTSQPFLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.3

37.4

Major BPS

57.5

0.19

1.3

60.2

42.9

Major PPT

79.5

0.66

0.7

76.8

25.1

Minor 5ss

45.8

-0.4

2.5

58.4

45.9

Minor BPS

35.9

-1

2.2

40.71

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006936

4823748 - 4848189

24442