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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4844083_4844366_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4844083 - 4844366

Intron Length:

284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTATCATGTATC

Flanking Amino Acid:

DAVMRVRTSTGIRATDFFGA

Intron Amino Acid Position:

784

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

81.3

32.8

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

84.1

0.77

0.7

80.1

25.2

Minor 5ss

31.8

-2.1

3.6

48.2

47.9

Minor BPS

48.1

-0.1

65.52

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006936

4823748 - 4848189

24442