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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4852580_4853811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4852580 - 4853811

Intron Length:

1232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

CTTTTGTAAAGA

Flanking Amino Acid:

YVRELMKYIQVDSYGKCLHN

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

79.9

0.67

0.8

78.1

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

44.5

-0.4

2.5

61.69

45.2

Associated Gene:

Gene:

FUT11

Ensembl Gene ID:

ENSAPLG00000006537

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006781

4851866 - 4858741

6876