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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4867272_4868131_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4867272 - 4868131

Intron Length:

860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAATTAAA

5'SS Class:

major

3'SS Sequence:

TTTCCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

ACAGAGATAATA

Flanking Amino Acid:

MFYDCVARAEKERRENEDEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

78.9

29.6

Major BPS

0.3

62.3

30.4

Major PPT

86.4

0.82

0.8

84.4

30.5

Minor 5ss

36.8

-1.5

2.7

42.7

38.4

Minor BPS

37.7

-0.9

2.2

44.15

38.2

Associated Gene:

Gene:

CHCHD1

Ensembl Gene ID:

ENSAPLG00000024691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032827

4866320 - 4868245

1926