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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4888395_4888470_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4888395 - 4888470

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGACCAAG

5'SS Class:

major

3'SS Sequence:

GCAGCAGCTGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTCAA

U12 Branch Point Sequence:

CTTCAATGTACT

Flanking Amino Acid:

VSKYVPWIKKAVASGL*

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.2

58.6

42.2

Major BPS

69.4

0.48

71.6

33.8

Major PPT

48.1

-0.1

1.1

41.8

37.5

Minor 5ss

40.5

-1.1

2.9

48.4

42.1

Minor BPS

42.9

-0.4

2.2

65.09

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039868

4887674 - 4888491

818