Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_4958868_4959580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4958868 - 4959580

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAACT

5'SS Class:

strong_major

3'SS Sequence:

TCTGGTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTTAC

U12 Branch Point Sequence:

TACCTGCTGACT

Flanking Amino Acid:

SPVRQKKKHTGMASIDSSAP

Intron Amino Acid Position:

1132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

78.1

36.3

Major BPS

62.6

0.31

1.1

55.1

41.7

Major PPT

71.3

0.48

65.2

41.2

Minor 5ss

34.7

-1.7

3.3

49.7

46.3

Minor BPS

42.9

-0.4

2.3

61.73

42.2

Associated Gene:

Gene:

ZSWIM8

Ensembl Gene ID:

ENSAPLG00000007548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007864

4904910 - 4969437

64528