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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4962794_4965136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4962794 - 4965136

Intron Length:

2343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TTGCTCTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TGGGTCCTAATG

Flanking Amino Acid:

TGLSLSSNVAIGSVHAGSTF

Intron Amino Acid Position:

1595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

35.3

Major BPS

81.9

0.79

0.9

80.1

Major PPT

83.6

0.76

0.8

81.4

30.7

Minor 5ss

39.9

-1.1

3.4

54.7

43.6

Minor BPS

47.7

-0.3

1.8

51.94

43.1

Associated Gene:

Gene:

ZSWIM8

Ensembl Gene ID:

ENSAPLG00000007548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007864

4904910 - 4969437

64528