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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4965311_4966707_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4965311 - 4966707

Intron Length:

1397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTGAC

U12 Branch Point Sequence:

TGCTGCTTGACT

Flanking Amino Acid:

LHYLHSAYRVGMLALEMLGR

Intron Amino Acid Position:

1653

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

75.2

40.6

Major BPS

56.2

0.15

1.3

44.3

Major PPT

76.9

0.61

0.7

Minor 5ss

-1.6

3.3

45.6

43.8

Minor BPS

65.1

0.56

1.8

79.9

42.3

Associated Gene:

Gene:

ZSWIM8

Ensembl Gene ID:

ENSAPLG00000007548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007864

4904910 - 4969437

64528