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Intron Name: Anas_platyrhynchos_platyrhynchos_6_498193_498972_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
498193 - 498972

Intron Length:
780

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACGAGT

5'SS Class:
major

3'SS Sequence:
GGATTTATTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GATTTAT

U12 Branch Point Sequence:
GTTTCTTGGATT

Flanking Amino Acid:
LCLPVEELNADLVQVAFLTC

Intron Amino Acid Position:
212

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1.2
73.4
43.3

Major BPS
70.9
0.52
1.2
63.7
43.9

Major PPT
73.4
0.53
1
66.6
43.7

Minor 5ss
39.5
-1.2
3.2
57.9
46.4

Minor BPS
64.9
0.55
1.4
80.32
35.6

Associated Gene:

Gene:
MINPP1

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

478658 - 504554
25897