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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4982887_4984066_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4982887 - 4984066

Intron Length:

1180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TGCTGTTCACCA

Flanking Amino Acid:

NGPNYHKGIDWYMEFFPIPS

Intron Amino Acid Position:

652

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

80.7

31.6

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

69.3

0.43

65.2

41.2

Minor 5ss

38.2

-1.3

3.1

49.9

40.6

Minor BPS

43.9

-0.4

2.1

55.58

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008309

4978560 - 5000084

21525