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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4991189_4991601_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4991189 - 4991601

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCACA

5'SS Class:

major

3'SS Sequence:

TTTTCTCTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

GCATCTGCATCT

Flanking Amino Acid:

RRGFIHNGIMVLPRQTCGLF

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

69.4

36.6

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

84.3

0.77

0.9

85.1

29.7

Minor 5ss

34.4

-1.8

2.8

37.9

40.9

Minor BPS

41.3

-0.5

2.2

57.38

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008309

4978560 - 5000084

21525