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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4991788_4993302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4991788 - 4993302

Intron Length:

1515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TCAATATTGAAT

Flanking Amino Acid:

QMKLNKQFAVEHGIPTDLGY

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

66.2

39.3

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

81.3

0.7

0.9

77.7

36.1

Minor 5ss

29.7

-2.3

3.5

37.8

42.4

Minor BPS

46.8

-0.1

1.7

62.47

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008309

4978560 - 5000084

21525