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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5158396_5172288_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5158396 - 5172288

Intron Length:

13893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTCGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

TACATCTCCATT

Flanking Amino Acid:

ICRLLKHPNIVRLHDSISEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.9

36.2

Major BPS

64.7

0.37

1.3

74.7

Major PPT

81.4

0.71

0.9

76.5

37.5

Minor 5ss

48.6

-0.1

2.8

64.8

41.1

Minor BPS

45.1

-0.3

1.9

61.41

42.8

Associated Gene:

Gene:

CAMK2G

Ensembl Gene ID:

ENSAPLG00000008750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009161

5117244 - 5220529

103286