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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5172349_5218645_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5172349 - 5218645

Intron Length:

46297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTACTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TGTTTCTTACTC

Flanking Amino Acid:

IINTKKLSARDHQKLEREAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

1.1

80.8

31.8

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

83.9

0.76

0.8

80.9

30.9

Minor 5ss

33.6

-1.9

3.1

44.2

43.6

Minor BPS

66.4

0.49

1.6

74.33

36.8

Associated Gene:

Gene:

CAMK2G

Ensembl Gene ID:

ENSAPLG00000008750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009161

5117244 - 5220529

103286