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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5281589_5290731_R

Intron Information:

Intron Rank:

133553

Intron Class:

major

Intron Phase:

Intron Coordinates:

5281589 - 5290731

Intron Length:

9143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

ATGCTCTCAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

75.4

34.2

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

31.9

-2.1

3.2

42.1

Minor BPS

-0.1

1.6

55.1

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038473

5281566 - 5291637

10072