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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5366695_5375140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5366695 - 5375140

Intron Length:

8446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAACTCA

5'SS Class:

major

3'SS Sequence:

TGACTTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TGATCAACAACT

Flanking Amino Acid:

LKRDMPPAFIKVENACTKLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

64.7

Major BPS

73.5

0.59

81.3

29.9

Major PPT

71.7

0.49

0.9

65.3

36.1

Minor 5ss

45.2

-0.5

2.9

56.6

42.2

Minor BPS

48.6

-0

2.1

73.08

42.6

Associated Gene:

Gene:

VCL

Ensembl Gene ID:

ENSAPLG00000009928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039245

5345934 - 5406580

60647

ENSAPLT00000010396

5345934 - 5406580

60647