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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5381609_5386734_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5381609 - 5386734

Intron Length:

5126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTGCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

ATTTTTTGAAAA

Flanking Amino Acid:

SWDEDAWASKDTEAMKRALA

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

66.9

0.38

1.1

69.4

34.7

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

60.7

0.33

1.5

71.57

33.8

Associated Gene:

Gene:

VCL

Ensembl Gene ID:

ENSAPLG00000009928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039245

5345934 - 5406580

60647

ENSAPLT00000010396

5345934 - 5406580

60647