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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5386826_5388156_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5386826 - 5388156

Intron Length:

1331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATTC

5'SS Class:

strong_major

3'SS Sequence:

CTGTACATCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

GTTTTACTAACT

Flanking Amino Acid:

GWLRDPNAPPGDAGEQAIRQ

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

77.9

Major BPS

76.8

0.67

0.9

75.9

Major PPT

0.36

0.9

37.9

Minor 5ss

42.6

-0.8

3.1

59.6

Minor BPS

59.4

0.37

1.9

82.74

37.8

Associated Gene:

Gene:

VCL

Ensembl Gene ID:

ENSAPLG00000009928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039245

5345934 - 5406580

60647

ENSAPLT00000010396

5345934 - 5406580

60647