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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5389670_5389781_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5389670 - 5389781

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCACCA

5'SS Class:

major

3'SS Sequence:

TCTTCCTATTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTATTTTCACT

Flanking Amino Acid:

AIAKKIDAAQNWLADPNAGS

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.2

56.4

42.8

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

71.5

0.48

31.8

Minor 5ss

36.7

-1.5

3.2

49.5

46.2

Minor BPS

63.2

0.5

1.8

83.78

37.4

Associated Gene:

Gene:

VCL

Ensembl Gene ID:

ENSAPLG00000009928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010396

5345934 - 5406580

60647

ENSAPLT00000039245

5345934 - 5406580

60647