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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5404055_5404673_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5404055 - 5404673

Intron Length:

619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAGC

5'SS Class:

major

3'SS Sequence:

ACTTATTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATACTT

Flanking Amino Acid:

DKRIRTNLLQVCERIPTIST

Intron Amino Acid Position:

1053

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

69.7

40.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.8

0.6

0.8

74.3

35.5

Minor 5ss

32.7

-2

3.1

43.6

43.7

Minor BPS

55.3

0.25

1.8

79.74

Associated Gene:

Gene:

VCL

Ensembl Gene ID:

ENSAPLG00000009928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039245

5345934 - 5406580

60647

ENSAPLT00000010396

5345934 - 5406580

60647