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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5414549_5415695_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5414549 - 5415695

Intron Length:

1147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

CTCCCTTTCACA

Flanking Amino Acid:

EEIDAIIDKSGSTVFAEIQG

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

79.8

0.67

0.7

74.6

27.5

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

54.4

0.13

1.8

63.93

Associated Gene:

Gene:

AP3M1

Ensembl Gene ID:

ENSAPLG00000010488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010954

5411057 - 5426060

15004