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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5418580_5425985_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5418580 - 5425985

Intron Length:

7406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTATTTTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

67.1

44.6

Major BPS

89.7

0.98

0.7

89.9

Major PPT

78.1

0.63

0.9

74.4

35.3

Minor 5ss

30.7

-2.2

3.4

40.1

Minor BPS

80.2

1.03

1.1

92.12

30.1

Associated Gene:

Gene:

AP3M1

Ensembl Gene ID:

ENSAPLG00000010488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010954

5411057 - 5426060

15004