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Intron Name: Anas_platyrhynchos_platyrhynchos_6_558672_591944_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

558672 - 591944

Intron Length:

33273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCCA

5'SS Class:

major

3'SS Sequence:

CCTTCCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ACTCTCTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

65.1

40.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

73.1

0.52

0.7

65.5

30.4

Minor 5ss

31.1

-2.2

3.2

40.1

45.4

Minor BPS

71.8

0.76

1.2

79.24

37.1

Associated Gene:

Gene:

SGMS1

Ensembl Gene ID:

ENSAPLG00000002477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040702

545148 - 603178

58031