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Intron Name: Anas_platyrhynchos_platyrhynchos_6_56270_57537_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56270 - 57537

Intron Length:

1268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

GTCCTCCAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

TTGTCCTCCAAA

Flanking Amino Acid:

TLQEVYIELFDQIDENLKLA

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.2

36.5

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

0.32

58.8

36.2

Minor 5ss

32.2

-2

3.1

37.6

42.2

Minor BPS

50.2

-0

2.1

68.96

43.2

Associated Gene:

Gene:

ERLIN1

Ensembl Gene ID:

ENSAPLG00000012553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013083

46851 - 65794

18944