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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5847087_5851159_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5847087 - 5851159

Intron Length:

4073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGAGA

5'SS Class:

major

3'SS Sequence:

TTTGTTTCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TCTGCATCATCT

Flanking Amino Acid:

FIDNALQDERNKVLVHCAMG

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

72.4

38.8

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

0.79

0.8

80.9

31.1

Minor 5ss

33.3

-1.9

3.2

39.9

40.2

Minor BPS

46.7

-0.1

2.1

69.23

47.2

Associated Gene:

Gene:

DUPD1

Ensembl Gene ID:

ENSAPLG00000012079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012571

5846839 - 5867218

20380

ENSAPLT00000037944

5846839 - 5861267

14429