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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5851381_5860821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5851381 - 5860821

Intron Length:

9441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

TTTGTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTGTTTTAACA

Flanking Amino Acid:

EVWPNLYIGDEKTALDRYSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

69.1

37.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

84.2

0.77

0.9

35.4

Minor 5ss

35.2

-1.7

3.2

41.6

38.8

Minor BPS

75.7

0.8

1.2

82.25

33.1

Associated Gene:

Gene:

DUPD1

Ensembl Gene ID:

ENSAPLG00000012079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037944

5846839 - 5861267

14429

ENSAPLT00000012571

5846839 - 5867218

20380