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Intron Name: Anas_platyrhynchos_platyrhynchos_6_585965_586047_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

585965 - 586047

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTCCT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

CAGACATAAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

42.9

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

48.5

-0.1

2.5

68.9

41.6

Minor BPS

45.8

-0.2

1.9

58.78

44.4

Associated Gene:

Gene:

SGMS1

Ensembl Gene ID:

ENSAPLG00000002477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037394

585880 - 605605

19726