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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5912489_5934119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5912489 - 5934119

Intron Length:

21631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TAATTCATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTCCTCTTAATT

Flanking Amino Acid:

FIHKALNTPGEKLSLRQTEC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

82.4

29.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

78.3

0.64

0.9

39.2

Minor 5ss

41.2

-1

2.9

57.1

47.2

Minor BPS

75.7

0.89

1.1

84.73

36.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036822

5908335 - 5934337

26003