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Intron Name: Anas_platyrhynchos_platyrhynchos_6_5951134_5952196_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5951134 - 5952196

Intron Length:

1063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAG

U12 Branch Point Sequence:

TCCAGGTCAGTT

Flanking Amino Acid:

LTMLNFFVTEYTPRSWNFLH

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

82.7

29.2

Major BPS

51.9

0.05

1.6

51.5

43.9

Major PPT

80.3

0.68

0.8

73.8

36.9

Minor 5ss

38.4

-1.3

2.7

48.5

40.3

Minor BPS

34.1

-1.1

2.4

48.06

45.2

Associated Gene:

Gene:

SAMD8

Ensembl Gene ID:

ENSAPLG00000012180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012687

5944072 - 5952501

8430