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Intron Name: Anas_platyrhynchos_platyrhynchos_6_6002260_6003021_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6002260 - 6003021

Intron Length:

762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

CTTTTCTCAATA

Flanking Amino Acid:

KKGGIIAIDNVLWSGKVLKP

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

60.7

0.27

65.3

28.1

Major PPT

77.1

0.61

0.8

74.2

29.5

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

67.1

0.53

1.5

74.85

37.3

Associated Gene:

Gene:

COMTD1

Ensembl Gene ID:

ENSAPLG00000012709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013230

6001865 - 6008440

6576