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Intron Name: Anas_platyrhynchos_platyrhynchos_6_602882_605202_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

602882 - 605202

Intron Length:

2321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTTCCTAATT

Flanking Amino Acid:

WWYHTMANQQVLKEASQTNL

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

81.1

26.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

86.1

0.81

0.7

81.2

30.4

Minor 5ss

-1

2.9

52.8

38.5

Minor BPS

74.5

0.85

1.6

92.26

Associated Gene:

Gene:

SGMS1

Ensembl Gene ID:

ENSAPLG00000002477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042779

591504 - 605605

14102

ENSAPLT00000037394

585880 - 605605

19726

ENSAPLT00000002503

545148 - 620148

75001