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Intron Name: Anas_platyrhynchos_platyrhynchos_6_6275516_6296514_F

Intron Information:

Intron Rank:

134610

Intron Class:

major

Intron Phase:

Intron Coordinates:

6275516 - 6296514

Intron Length:

20999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCCCA

5'SS Class:

major

3'SS Sequence:

TTCTAATTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGCTTCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.1

55.5

43.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.7

0.67

0.8

77.2

35.6

Minor 5ss

37.2

-1.5

3.2

49.3

46.4

Minor BPS

54.9

0.23

1.6

73.27

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045840

6273810 - 6317691

43882