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Intron Name: Anas_platyrhynchos_platyrhynchos_6_629009_629393_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

629009 - 629393

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTACGTATG

5'SS Class:

major

3'SS Sequence:

AATTTCTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

AATTTCTTAACA

Flanking Amino Acid:

NPQSTCPVGGAAMCMAMGPG

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

72.9

44.2

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

75.5

0.57

70.6

39.1

Minor 5ss

37.8

-1.4

42.4

44.5

Minor BPS

82.89

30.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002662

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002706

619985 - 637544

17560