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Intron Name: Anas_platyrhynchos_platyrhynchos_6_6535956_6660971_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6535956 - 6660971

Intron Length:

125016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCACCT

5'SS Class:

major

3'SS Sequence:

TTGTCGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATCAT

U12 Branch Point Sequence:

TGGAGTATCATT

Flanking Amino Acid:

GLGEEQTPKSRSLEGLKTFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.2

44.9

Major BPS

70.5

0.51

1.3

41.2

Major PPT

82.4

0.73

0.9

76.8

37.3

Minor 5ss

38.8

-1.3

3.4

57.7

46.5

Minor BPS

38.2

-0.8

2.1

53.66

42.3

Associated Gene:

Gene:

LRMDA

Ensembl Gene ID:

ENSAPLG00000012993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013525

6535780 - 6966178

430399