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Intron Name: Anas_platyrhynchos_platyrhynchos_6_660319_661534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

660319 - 661534

Intron Length:

1216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTACATTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTCAGTTTAATG

Flanking Amino Acid:

RSIIRPPSIREIYMNVPVGA

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

1.1

35.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

70.6

0.46

0.9

62.3

38.7

Minor 5ss

38.5

-1.3

3.1

50.7

45.7

Minor BPS

52.3

-0

1.9

59.21

43.5

Associated Gene:

Gene:

A1CF

Ensembl Gene ID:

ENSAPLG00000002964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003020

654186 - 676600

22415