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Intron Name: Anas_platyrhynchos_platyrhynchos_6_665795_668904_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

665795 - 668904

Intron Length:

3110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTACA

5'SS Class:

strong_major

3'SS Sequence:

AATCCCTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATGAT

U12 Branch Point Sequence:

ATCCCTTTAAAG

Flanking Amino Acid:

AAMARRKLLPGRIQLWGHPI

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

1.1

81.8

31.1

Major BPS

69.5

0.48

1.2

59.7

46.7

Major PPT

65.4

0.35

1.1

63.9

36.2

Minor 5ss

32.4

-2

2.4

35.7

40.3

Minor BPS

59.5

0.16

1.5

60.47

41.3

Associated Gene:

Gene:

A1CF

Ensembl Gene ID:

ENSAPLG00000002964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003020

654186 - 676600

22415