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Intron Name: Anas_platyrhynchos_platyrhynchos_6_670823_671569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

670823 - 671569

Intron Length:

747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

ACTTCTTTACAA

Flanking Amino Acid:

EDELIPLCEKIGKIYEMRMM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.3

36.2

Major BPS

73.5

0.59

81.3

29.9

Major PPT

89.8

0.9

0.7

85.1

28.4

Minor 5ss

39.6

-1.2

3.3

57.8

40.6

Minor BPS

57.2

0.22

1.7

66.5

40.2

Associated Gene:

Gene:

A1CF

Ensembl Gene ID:

ENSAPLG00000002964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034607

670688 - 679045

8358

ENSAPLT00000003020

654186 - 676600

22415